Insertion junction: LMJ.RY0402.067464_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.067464
Chromosome:chromosome 9
Location:4079885
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g393432 (1 of 1) IPR002421//IPR029060 - 5'-3' exonuclease, N-terminal // PIN domain-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCAGCACTGCAGCGGGCGACGATGCAG
Internal bar code:GTGCCAACGGGACCCCGCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:514
LEAP-Seq percent confirming:98.9943
LEAP-Seq n confirming:3642
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AAATTGGTGTTTGGATGGGA
Suggested primer 2:ATGCAAACGGGCAGAATATC