Insertion junction: LMJ.RY0402.067548_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.067548
Chromosome:chromosome 16
Location:2526632
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g661150 CGL5 Conserved in the Green Lineage; (1 of 2) 5.2.1.14 - Beta-carotene isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATCCCTTCGCGGAGAAGACCGTGTACAA
Internal bar code:GGGAGTCCGAAGTACAGTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:925
LEAP-Seq percent confirming:98.8354
LEAP-Seq n confirming:1867
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTCTCCAGAAAGACGCC
Suggested primer 2:CAGTGCTGACCCCCACTATT