Insertion junction: LMJ.RY0402.067660_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.067660
Chromosome:chromosome_11
Location:1639481
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre11.g467770 PGK1 Phosphoglycerate kinase, chloroplast precursor antisense intron

Insertion site details

Flanking sequence (orientation from cassette outwards):TGTCACTGACCCTGCTGAACTCATGTCCTC
Internal bar code:AGGACCCGCTGTGTCTTCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:237
LEAP-Seq percent confirming:99.6004
LEAP-Seq n confirming:997
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTGGGAGCGTGATATTT
Suggested primer 2:CAAGAAGCTGGAGGAGATGG