Insertion junction: LMJ.RY0402.067947_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.067947
Chromosome:chromosome 9
Location:3074892
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g387100 CGL12,PTST1 (1 of 5) PTHR10343 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT; Protein targeting to starch 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGACAGCACTCAACCGGCAGGCGCCGCG
Internal bar code:TGGGATGCTCGTATAGGAAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:747
LEAP-Seq percent confirming:96.124
LEAP-Seq n confirming:496
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGTGAGTTATCCTGTGT
Suggested primer 2:AAACCGTTTGAGGCATTGAC