Insertion junction: LMJ.RY0402.068032_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.068032
Chromosome:chromosome 17
Location:3810017
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g727801 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCCATCGTACTCGTAGCTGCTATACAA
Internal bar code:CCGGAAGCCTTAATAAGCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTACAAGCACCCACGATA
Suggested primer 2:GTTGGTACTCCCGTGATGCT