Insertion junction: LMJ.RY0402.068812_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.068812
Chromosome:chromosome 15
Location:737491
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre15.g640250 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGTATAATTTAGCTGCTGCCTCACGAGG
Internal bar code:ACCTGACATCTTCTGCGCCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:808
LEAP-Seq percent confirming:99.2605
LEAP-Seq n confirming:2416
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGATGAGGGGTGTTACG
Suggested primer 2:ATTCCCTCCTCCTCCTTGAA