Insertion junction: LMJ.RY0402.068866_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.068866
Chromosome:chromosome 17
Location:3809443
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g727801 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCCTTGCGTGCGCAAGTCCACCACAC
Internal bar code:GAATGCGGCTTATACGCCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:99.7461
LEAP-Seq n confirming:17676
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCTGACCTGACAACCT
Suggested primer 2:CACCTGTGATCAGTGGGTTG