Insertion junction: LMJ.RY0402.069139_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.069139
Chromosome:chromosome 16
Location:3125948
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g665650 HFLX1,HFLX Putative chloroplast GTP-bidning protein involved in ribosome hibernation or ribosome biogenesis; (1 of 1) K03665 - GTP-binding protein HflX (hflX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCCGCCGCTCTCACCTCATCTGGGTTG
Internal bar code:AACAGGTGGCCTAGCTCTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:102
LEAP-Seq percent confirming:83.0266
LEAP-Seq n confirming:3248
LEAP-Seq n nonconfirming:664
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTGTATGTGGTGCTGAT
Suggested primer 2:GCCAGTACTCCTCTTCGTGC