Insertion junction: LMJ.RY0402.069175_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.069175
Chromosome:chromosome 3
Location:2083448
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g156700 FAP185,Nphp3 (1 of 2) IPR011990//IPR013026//IPR019734 - Tetratricopeptide-like helical domain // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat; Flagellar Associated Protein 185 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGATGAGTCAAAGCTGTTCGTCTGG
Internal bar code:CGTACGTGGCGACTGTATCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:78.3605
LEAP-Seq n confirming:3795
LEAP-Seq n nonconfirming:1048
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTCTGAGTGCAACCCTC
Suggested primer 2:GCTGCTTGAGGTACAGCCAT