Insertion junction: LMJ.RY0402.069491_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.069491
Chromosome:chromosome 17
Location:1222049
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g705050 LIC1 (1 of 3) PF02931//PF02932 - Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD) // Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb); Ligand-gated ion-channel 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGCGTCGCTCACATGCGCGGCAGTGG
Internal bar code:AAACGATCTCCGTGCTCAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:613
LEAP-Seq percent confirming:98.8657
LEAP-Seq n confirming:2789
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGTTTGAGGTGGAGGT
Suggested primer 2:GCTCATGTTCTTGCCTCTCC