Insertion junction: LMJ.RY0402.069562_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.069562
Chromosome:chromosome 17
Location:3709559
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g727100 TIC56 (1 of 2) PF14237 - Domain of unknown function (DUF4339) (DUF4339); 56 kDa subunit of translocon at the inner membrane of chloroplasts 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCGTCAGGGCAGCCGGTTACGTTGTCA
Internal bar code:CGTGGTCGCCGGTCCCCCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:83
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGCCATTGTGTGCTCT
Suggested primer 2:AGGCAGCAGCAGTGCTTTAT