Insertion junction: LMJ.RY0402.069924_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.069924
Chromosome:chromosome 10
Location:368849
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACCTGCATGCTTGCCCACTGACCTCCC
Internal bar code:CGATACTGGTTGGTGTGAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:49
LEAP-Seq percent confirming:98.8327
LEAP-Seq n confirming:1016
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACGACTACTCGGCACTG
Suggested primer 2:TCGTACAGCGGGATGATGTA