Insertion junction: LMJ.RY0402.069959_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.069959
Chromosome:chromosome 17
Location:3160276
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g721750 ELG9 Exostosin-like glycosyltransferase 9; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCCACCCCTCGAGTTGGCTAGGGTTCT
Internal bar code:CGGCAGCCGTGTCCCGAACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:453
LEAP-Seq percent confirming:37.9565
LEAP-Seq n confirming:821
LEAP-Seq n nonconfirming:1342
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGCTTAGCTGCTGTTGG
Suggested primer 2:GACACAGCATTTGCATCCAC