Insertion junction: LMJ.RY0402.070020_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.070020
Chromosome:chromosome 7
Location:351488
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g314650 RECA1,RECA,EZY19 Chloroplast RecA recombination protein; (1 of 1) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCCTCACAGTACCTCCACGGGCTCCC
Internal bar code:AAATGTGTACGCTTGTGTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:94.5736
LEAP-Seq n confirming:366
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGAGAGCAGGGACAAGGA
Suggested primer 2:CCAGGTTTAAAGCTCGGTGA