Insertion junction: LMJ.RY0402.070118_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.070118
Chromosome:chromosome 17
Location:1494484
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g707050 UAF5,SPL12 U2 snRNP auxiliary factor associated protein; (1 of 1) K13093 - HIV Tat-specific factor 1 (HTATSF1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCGGGTGGCTGAGTGAGGGCGATGGGAT
Internal bar code:CGATCGCGGCAGCGCGAGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:45
LEAP-Seq percent confirming:51.3966
LEAP-Seq n confirming:1288
LEAP-Seq n nonconfirming:1218
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGAGTGAGACGGAGGA
Suggested primer 2:ACGAGTTTTACACAGGCGCT