Insertion junction: LMJ.RY0402.070179_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.070179
Chromosome:chromosome 3
Location:2277798
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g158050 PPP11 (1 of 1) PF00686//PF07228 - Starch binding domain (CBM_20) // Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCCGGCTCTAGGTCAAGGTCCACAGAC
Internal bar code:TAGGACGTGCTAACACTCCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:89.0059
LEAP-Seq n confirming:4647
LEAP-Seq n nonconfirming:574
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTCAAGGAGACTGGTAG
Suggested primer 2:TTGGGAGTTCGCTAAAGGTG