Insertion junction: LMJ.RY0402.070229_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.070229
Chromosome:chromosome 17
Location:2966437
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g720150 (1 of 1) IPR000104//IPR008752 - Antifreeze protein, type I // Peptidase M11, gametolysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGCCTGCACCCGCCACCCCGCCTGCC
Internal bar code:TGAGTGCACCTCGCAATTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:428
LEAP-Seq percent confirming:80.5993
LEAP-Seq n confirming:1587
LEAP-Seq n nonconfirming:382
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGACAACAAATACCCCTG
Suggested primer 2:CCACAATGATGAAGACCGTG