Insertion junction: LMJ.RY0402.070444_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.070444
Chromosome:chromosome 2
Location:407376
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g076050 (1 of 2) IPR000008//IPR000104 - C2 domain // Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCGAAGGGTCGCTGCGGCAGGCTGCT
Internal bar code:TCACGGCTTCGATCTTCGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:51.8099
LEAP-Seq n confirming:1417
LEAP-Seq n nonconfirming:1318
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGACTTCCTGGATCGGG
Suggested primer 2:GGATCCACAGCACCAAAGTT