Insertion junction: LMJ.RY0402.071229_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.071229
Chromosome:chromosome 9
Location:2992479
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g387550 CGL142 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCCCAGTTGTACAGAGCCGAGTGGGAGG
Internal bar code:GGGGGTACAAAATGGGCTCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:906
LEAP-Seq percent confirming:99.2606
LEAP-Seq n confirming:5101
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CATCAGGCTGAGCTGTGGTA
Suggested primer 2:TCATCCTCCACGGACTTTTC