Insertion junction: LMJ.RY0402.071891_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.071891
Chromosome:chromosome 5
Location:1830936
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g242000 CHLD,CHLD1 (1 of 1) K03404 - magnesium chelatase subunit D (chlD, bchD); Magnesium chelatase subunit D, chloroplast precursor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCGCAACACCGGAAGTTCCCCCGCGCG
Internal bar code:CTTCCGGCGCTTGGCCTCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:918
LEAP-Seq percent confirming:97.3908
LEAP-Seq n confirming:3322
LEAP-Seq n nonconfirming:89
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTTGCGCTTCTGACTAC
Suggested primer 2:GCGGTCACACACATATCGAC