Insertion junction: LMJ.RY0402.071949_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.071949
Chromosome:chromosome 3
Location:5835132
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g189200 (1 of 1) PTHR13192//PTHR13192:SF3 - MY011 PROTEIN // METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA TYPE D PROTEIN, MITOCHONDRIAL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCACGTGCCCCGCTTGCACGGATGGATC
Internal bar code:CCGTGTTGCATGAGCAACTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:508
LEAP-Seq percent confirming:68.1831
LEAP-Seq n confirming:2353
LEAP-Seq n nonconfirming:1098
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTGAAAACCCTGGATGC
Suggested primer 2:CTTGCTACTGCTGCTTGTGC