Insertion junction: LMJ.RY0402.072007_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.072007
Chromosome:chromosome 16
Location:561361
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g692500 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAGTATCGCCTGTGTACTACTGCATCT
Internal bar code:GGTGTAATCTATGTCTGCATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:122
LEAP-Seq percent confirming:99.5578
LEAP-Seq n confirming:1801
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCTGTAACATCCGCATT
Suggested primer 2:GAAAGCGCTCAACGCTAAGT