Insertion junction: LMJ.RY0402.072240_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.072240
Chromosome:chromosome 16
Location:5552612
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g680200 (1 of 1) PTHR31419//PTHR31419:SF1 - FAMILY NOT NAMED // AUXIN EFFLUX CARRIER FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGGGGTTCGAAGCCACCCAGGAAAAT
Internal bar code:CCGGGCGTCTAACGGAGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:153
LEAP-Seq percent confirming:90.566
LEAP-Seq n confirming:768
LEAP-Seq n nonconfirming:80
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCACCAGATCCCATCTA
Suggested primer 2:CATCCTCTGTCTTGTGCGAA