Insertion junction: LMJ.RY0402.072266_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.072266
Chromosome:chromosome 3
Location:7687432
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g203730 DEGO1,DEG12 Inactive Deg protease; (1 of 4) PTHR22939//PTHR22939:SF83 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 2, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACGACGGAAGGAAACACGCAGGACGG
Internal bar code:ACGTACGCGGGAATGGGGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:292
LEAP-Seq percent confirming:41.2445
LEAP-Seq n confirming:2890
LEAP-Seq n nonconfirming:4117
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTAACAAGGACGATGGC
Suggested primer 2:GTTAGCGAGCACAAGGGAAG