Insertion junction: LMJ.RY0402.072288_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.072288
Chromosome:chromosome 1
Location:344650
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g002100 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGTGCGTTGTAGCATGCGTGCACTATT
Internal bar code:ATATCGGCACAGCGAACTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:573
LEAP-Seq percent confirming:99.2049
LEAP-Seq n confirming:1123
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTGTCTTTTGATTAGGC
Suggested primer 2:GCTTACGTGTTTCTAGGCCG