Insertion junction: LMJ.RY0402.072489_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.072489
Chromosome:chromosome 6
Location:3158400
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g275450 (1 of 1) PF00069//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACATCACGACCCCTCGCGCCCTCGCCTC
Internal bar code:CCGGCAGGTAGGCGCACCCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:225
LEAP-Seq percent confirming:74.778
LEAP-Seq n confirming:4631
LEAP-Seq n nonconfirming:1562
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGAGATGCAGGTGACT
Suggested primer 2:GCTACTGCTTCGGAGGAATG