Insertion junction: LMJ.RY0402.072504_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.072504
Chromosome:chromosome 12
Location:9056516
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g543303 CGLD20,CGLD6 conserved protein with COG5222 RING zinc finger domain; (1 of 1) PF08783 - DWNN domain (DWNN) 3'UTR|intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGTGTCAGGGGAGTGTGTGTTGCGGGT
Internal bar code:TGGGCCGGTGTGCATGCCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:969
LEAP-Seq percent confirming:98.9437
LEAP-Seq n confirming:4871
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTCTTCATGAGCAACGG
Suggested primer 2:CCCCTGTCCCTACCAATTTT