Insertion junction: LMJ.RY0402.072538_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.072538
Chromosome:chromosome 9
Location:6942216
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g410450 ROC15,ROC74 Rhythm Of Chloroplast 15; (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCTTGGGAAGGGAGTAGCATTGCCTGG
Internal bar code:ACTTTGCAACACAGACGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:97.4026
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAACGAGTCTTGGCCTG
Suggested primer 2:TAGCAACTCGTGTTTCGCAC