Insertion junction: LMJ.RY0402.072841_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.072841
Chromosome:chromosome 8
Location:2534990
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g372250 YDIF1,YDIF Putative soluble chloroplast ABCF protein, related to bacterial YdiF.; (1 of 1) PTHR19211//PTHR19211:SF48 - ATP-BINDING TRANSPORT PROTEIN-RELATED // ABC TRANSPORTER F FAMILY MEMBER 2-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGAGGGGGCATGGGCGGGGGGCATGG
Internal bar code:ATACGCATCCGAGTAAGGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:354
LEAP-Seq percent confirming:91.5038
LEAP-Seq n confirming:1077
LEAP-Seq n nonconfirming:100
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACAGGAGGCGAATTTTT
Suggested primer 2:GGGTGCGGACAAGTCATAGT