Insertion junction: LMJ.RY0402.072917_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.072917
Chromosome:chromosome 16
Location:2983778
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g664350 CLD1 (1 of 1) PTHR10992//PTHR10992:SF752 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // ALPHA/BETA-HYDROLASE-LIKE PROTEIN; Putative Chlorophyll dephytylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGGCCAGAGGCTACAGGCTTACCACAG
Internal bar code:GCGGTTACTATCTACAGTCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:444
LEAP-Seq percent confirming:99.7659
LEAP-Seq n confirming:3835
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCTGTGTAACAATTCCG
Suggested primer 2:ATGAACTCGGCCATGAAGTC