Insertion junction: LMJ.RY0402.073265_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.073265
Chromosome:chromosome 15
Location:177908
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre15.g635100 (1 of 2) IPR000104//IPR010402 - Antifreeze protein, type I // CCT domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTCGCCGTACCCCTCATCCTGACCTTC
Internal bar code:AGTCGTCGGCGGGTTGTATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:429
LEAP-Seq percent confirming:66.4311
LEAP-Seq n confirming:564
LEAP-Seq n nonconfirming:285
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGATATCAGGGCGTGTGGTA
Suggested primer 2:CATGAGGTGTACATGGCGAC