Insertion junction: LMJ.RY0402.073325_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.073325
Chromosome:chromosome 13
Location:3741109
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g589426 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTTATCGACCTAGTTAACTAGAAGCTC
Internal bar code:TGTGTGTTCCAAAGCCCCACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:830
LEAP-Seq percent confirming:99.606
LEAP-Seq n confirming:2275
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGGTCTCCTTGGTATCG
Suggested primer 2:ATGCCCGAAACTACGATGAC