Insertion junction: LMJ.RY0402.073333_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.073333
Chromosome:chromosome 4
Location:1871316
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g217850 (1 of 3) IPR000104//IPR003439//IPR003593//IPR013525//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCCACCTGTGGGGGGGGTGCGTACTAC
Internal bar code:TGTACTGACGCTTCACCGACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:193
LEAP-Seq percent confirming:99.5238
LEAP-Seq n confirming:209
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGGTAAGTATGGTCTCGG
Suggested primer 2:GGATGTTTGGAAAAGCGGTA