Insertion junction: LMJ.RY0402.073833_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.073833
Chromosome:chromosome 12
Location:5909751
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre12.g534100 COL,CON2 (1 of 3) PTHR31319//PTHR31319:SF10 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-RELATED; CONSTANS-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGCTCACGGCGACGACAAGGACGCGG
Internal bar code:TCGAAGTTGACGGTGAGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:169
LEAP-Seq percent confirming:46.6826
LEAP-Seq n confirming:2153
LEAP-Seq n nonconfirming:2459
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTCCAAAGCCTTTCACA
Suggested primer 2:AAGCGGGAAGAGTGTGAGAA