Insertion junction: LMJ.RY0402.073835_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.073835
Chromosome:chromosome 3
Location:5153345
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g182150 TEF8 (1 of 1) PTHR30373:SF2 - UPF0603 PROTEIN YGCG; Thylakoid Lumen Protein 18.3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGCAGCACACGGTGTTCCGCATGCCCG
Internal bar code:ATTCGTGCCACGTGCTAGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:231
LEAP-Seq percent confirming:95.0739
LEAP-Seq n confirming:386
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACAACCACAGAAACCATGC
Suggested primer 2:GGCTATCGTAGCTACTGGCG