Insertion junction: LMJ.RY0402.073860_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.073860
Chromosome:chromosome 3
Location:8343749
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g198850 TL19 (1 of 3) PTHR31407//PTHR31407:SF18 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC; Thylakoid llumen protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAAGCCTCGGCCTCGCGCTCGCAGCGGG
Internal bar code:AGAGCTTGTGGCGGGAAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:194
LEAP-Seq percent confirming:52.8112
LEAP-Seq n confirming:526
LEAP-Seq n nonconfirming:470
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGATTACAGCGGGTGGTA
Suggested primer 2:GGAAACTCGGCAGCTACAAG