Insertion junction: LMJ.RY0402.074221_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.074221
Chromosome:chromosome 3
Location:4850026
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g179100 UFD1b UFD1b homolog; (1 of 1) PF00789//PF03152 - UBX domain (UBX) // Ubiquitin fusion degradation protein UFD1 (UFD1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGAGTGAGAGTGGGATTGGGATTAGG
Internal bar code:CCGGTCAGGTTCGCGTCAACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:550
LEAP-Seq percent confirming:99.8318
LEAP-Seq n confirming:1187
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTCTGTTGCTGTGTCGCC
Suggested primer 2:AAAGGCGTGTAAGAGCCTGA