Insertion junction: LMJ.RY0402.074287_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.074287
Chromosome:chromosome 11
Location:1587004
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467759 PIC1,PIC1-2 (1 of 2) PTHR34548:SF2 - PROTEIN TIC 21, CHLOROPLASTIC; Similar to AtTic21/PIC1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCTGAGGCCCAGCGTTTGGTGTTTGAC
Internal bar code:GGGTATTGAAGGTGAGACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:316
LEAP-Seq percent confirming:87.5068
LEAP-Seq n confirming:1618
LEAP-Seq n nonconfirming:231
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGGCGTGCTGTACTAAG
Suggested primer 2:CCCACTGATATGTCCCTGCT