Insertion junction: LMJ.RY0402.074517_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.074517
Chromosome:chromosome 10
Location:3642689
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g445650 SMC3 (1 of 1) K06669 - structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) (SMC3, CSPG6); Structural Maintenance of Chromosomes protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCGCGCGCTGTCGGGCGGCCAGAAGAC
Internal bar code:TTTACCTTGCGGGCTCATGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:81
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTCCGAGACGATCTAC
Suggested primer 2:ATCCTCGGAGTGCTGAGAAA