Insertion junction: LMJ.RY0402.074522_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.074522
Chromosome:chromosome 3
Location:5112469
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g181650 (1 of 1) PTHR20973//PTHR20973:SF0 - NON-SMC ELEMENT 1-RELATED // NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 1 HOMOLOG 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTGCAGATCAGAGCTTTCTGGCATCAG
Internal bar code:CGCACATACATTTAGCGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:95.2947
LEAP-Seq n confirming:14420
LEAP-Seq n nonconfirming:712
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCGTATCTTCATCAGTA
Suggested primer 2:AACGGCTATCTCACCACAGC