Insertion junction: LMJ.RY0402.075802_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.075802
Chromosome:chromosome 16
Location:4654837
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g687450 CPLD54 (1 of 1) PTHR16254//PTHR16254:SF6 - POTASSIUM/PROTON ANTIPORTER-RELATED // K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC; potassium ion transmembrane transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGGTGCCGGCCTTCAGCTCTCTGGAC
Internal bar code:GACATGGCCACGGGGACAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5
LEAP-Seq percent confirming:60.3736
LEAP-Seq n confirming:905
LEAP-Seq n nonconfirming:594
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCACCTCACCTCCCAC
Suggested primer 2:GACTCACCCAACCAAACCAC