Insertion junction: LMJ.RY0402.076021_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.076021
Chromosome:chromosome 13
Location:4103800
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g591501 PUS2 (1 of 2) PTHR11142:SF0 - TRNA PSEUDOURIDINE SYNTHASE-LIKE 1; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGTCTTCACACGTGCGACTGTGATCTC
Internal bar code:CTCGAGGTCGCCCGTCCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:545
LEAP-Seq percent confirming:96.9422
LEAP-Seq n confirming:856
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGTTGAGGGATGTATGG
Suggested primer 2:AAGTAGCACGTCACATCCCC