Insertion junction: LMJ.RY0402.076037_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.076037
Chromosome:chromosome 12
Location:7479228
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g556100 DNAAF13,SPAG1 Sperm-associated antigen 1; (1 of 1) PF00515//PF07719//PF13414//PF13877 - Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) // Potential Monad-binding region of RPAP3 (RPAP3_C) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGGCGAGCGCTGGACCTGAACTCGGGC
Internal bar code:GGTGTACGGGCTTGGGTGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:543
LEAP-Seq percent confirming:78.5331
LEAP-Seq n confirming:439
LEAP-Seq n nonconfirming:120
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGGCCTGAGACAGACGC
Suggested primer 2:TCTCCTCCTCCACAACCATC