Insertion junction: LMJ.RY0402.076246_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.076246
Chromosome:chromosome 12
Location:7480339
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g556100 DNAAF13,SPAG1 Sperm-associated antigen 1; (1 of 1) PF00515//PF07719//PF13414//PF13877 - Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) // Potential Monad-binding region of RPAP3 (RPAP3_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAGCCTTTGGATAGCAACCAGTGGAACC
Internal bar code:GGTGCACACAAATGTGGGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:1053
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAACTCATGGGCGTTCT
Suggested primer 2:GATGGTTGTGGAGGAGGAGA