Insertion junction: LMJ.RY0402.076396_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.076396
Chromosome:chromosome 11
Location:1300246
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467711 (1 of 3) PTHR30612 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCATGAATGTAATCCCCCCCTCCATGAA
Internal bar code:GAAATGCGGTGCTTGGGGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:479
LEAP-Seq percent confirming:99.8249
LEAP-Seq n confirming:1140
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATGTTGGGAAAGCACT
Suggested primer 2:TTTACACATGGCAGCAGCTC