Insertion junction: LMJ.RY0402.076543_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.076543
Chromosome:chromosome 4
Location:1290315
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g214801 5'UTR_intron|intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGGTGGGGAGTTAAACTTTCGTTCCCG
Internal bar code:ATGCAGTATAGACCGGGTGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:118
LEAP-Seq percent confirming:61.8342
LEAP-Seq n confirming:1753
LEAP-Seq n nonconfirming:1082
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAAATTAACTTGGACGGA
Suggested primer 2:CTCCAAGCTTGTAACTCCGC