Insertion junction: LMJ.RY0402.076606_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.076606
Chromosome:chromosome 4
Location:1846620
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g211600 snRK1,CKIN1,SNF1,SNRK1A (1 of 1) PTHR24343//PTHR24343:SF183 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTACATGGTTATAATAGACAATGCCGCC
Internal bar code:AGTATTGAGGGAGGATCGGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:48
LEAP-Seq percent confirming:90.8784
LEAP-Seq n confirming:269
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCATCATAACCCTCCTCC
Suggested primer 2:TTGTCCGCACACCACATACT