Insertion junction: LMJ.RY0402.076678_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.076678
Chromosome:chromosome 10
Location:6142680
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g463900 3'UTR|intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCGGTAAGTAACACATTCTACATCGCG
Internal bar code:GGTCACGGCTATTCGAGGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:98.806
LEAP-Seq n confirming:331
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGTTTGGCCCCTAGTTC
Suggested primer 2:TCATTTTTGCAGCTTTGCAC