Insertion junction: LMJ.RY0402.076813_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.076813
Chromosome:chromosome 4
Location:1281241
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g214850 (1 of 1) IPR000104//IPR000253 - Antifreeze protein, type I // Forkhead-associated (FHA) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCTTGGCCAGGCAGCGCCAAGCCGTGA
Internal bar code:TTCCGTGGGGCGTCCGCCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:42
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCGATACCTGTGAACCT
Suggested primer 2:ACTTGTGCCTGTTGTTGCTG