Insertion junction: LMJ.RY0402.076830_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.076830
Chromosome:chromosome 3
Location:1583560
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g152550 (1 of 1) IPR000104//IPR001680//IPR011041//IPR015943//IPR017986//IPR020472//IPR027417 - Antifreeze protein, type I // WD40 repeat // Soluble quinoprotein glucose/sorbosone dehydrogenase // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTGAGCCGTGGCCTGAAGCGCTGGGTG
Internal bar code:GGAGCGGCGCGATCGGTGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:411
LEAP-Seq percent confirming:99.3837
LEAP-Seq n confirming:1290
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGACCAGGCATAGCTCAC
Suggested primer 2:GTCCTTCTGCTCCTCCTCCT